Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20sorghi_20[genbank_20GCA_5F001263375.1_202015-08-07] 15,715 sequences; 99,534,058 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq4577 91.5 2e-13 >seq4577 Length=27044 Score = 91.5 bits (100), Expect = 2e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 193968 TCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATTACACAAGGTTTATCTAAGATC 194027 || || |||||||| || |||||||| || ||||||| | | | | |||| Sbjct 8604 TCACCTAGAAGAGGACGAACTTTTGTAACCCGAAAGATTAGTCGGGCGGTTGCAGAGATT 8545 Query 194028 TCTGTTGGATTACAGAAGATTCTTTATCTTGGTAATCTTAATGCTAAGAGGGATTGGGGA 194087 | ||| |||| || |||||| ||||| || ||| || ||| | ||||||||| Sbjct 8544 AGTCTTGCTCAACAGGAGTGTCTTTACCTTGGAAACCTTTCGGCCAAGCGAGATTGGGGA 8485 Query 194088 CACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGTTGCAACAGGATGAACCCGATGAT 194147 ||||| || |||||||| |||| |||||| ||||| || || ||| | ||||| || Sbjct 8484 CACGCCAAAGATTATGTCGAAGGAATGTGGAAGATGTTACAGCAAGATCAGCCCGACGAC 8425 Query 194148 TATGTGATTGCTACAGGTGAACAGTATTCTGTTAGAGA 194185 | ||| | || || || ||| |||||||||| || Sbjct 8424 TTTGTACTCGCGACCGGAGAAACTCATTCTGTTAGGGA 8387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807396565875400