Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20sorghi_20[genbank_20GCA_5F001263375.1_202015-08-07] 15,715 sequences; 99,534,058 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq10166 84.2 2e-11 >seq10166 Length=49910 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 111280 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111339 |||||||||||| | ||| || || ||| | || || | ||||||||||||| | ||| Sbjct 22392 GACAAAGAAGGCATCCCCCCGGACCAGCAACGTCTCATCTTTGCGGGCAAACAACTTGAA 22451 Query 111340 GATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTG 111399 || | |||| |||| || |||||||| ||||| || || || || ||||| || | Sbjct 22452 GACGGTCGAACTCTGGCGGACTATAATATCCAAAAGGAGTCCACGCTCCATTTGGTTCTT 22511 Query 111400 CGTCTGCGCGGTGG 111413 || || || ||||| Sbjct 22512 CGACTCCGTGGTGG 22525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422958976603000