Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20sorghi_20[genbank_20GCA_5F001263375.1_202015-08-07] 15,715 sequences; 99,534,058 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1054 93.3 5e-14 >seq1054 Length=9129 Score = 93.3 bits (102), Expect = 5e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 168430 TTACCACGGAGTGGAAATACCCCATAATGATCTCTACCCACGACGGAGAGACCAGCGACA 168489 ||||| | ||| || ||||| || |||| ||| | || | ||| ||||||||||| ||| Sbjct 4908 TTACCTCTGAGAGGGAATACGCCGTAATTATCGCGTCCTATGACCGAGAGACCAGCCACA 4967 Query 168490 GCGAGAGTTTTCGCTGAATCACCCTCTGTCACGATGAGTGTACACTTTCCAGACTGTGCC 168549 || | | ||| ||||| || || || |||| ||| |||||||| | | | | || | Sbjct 4968 GCCAAGGATTTGGCTGAGTCTCCTTCGGTCAAGATCAGTGTACAATCTGCGGCCTTCTTC 5027 Query 168550 GTACCAGCTTTGTTCGCATCGTCCAATTTGGGGATACCAGTGAT 168593 || || || || |||||||| |||| ||| || |||||||| Sbjct 5028 GTTCCGGCATTATTCGCATCTTCCAGCTTGACAATCCCAGTGAT 5071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588860303027000