Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20sorghi_20[genbank_20GCA_5F001263375.1_202015-08-07] 15,715 sequences; 99,534,058 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq8339 95.1 2e-14 >seq8339 Length=4102 Score = 95.1 bits (104), Expect = 2e-14 Identities = 140/198 (71%), Gaps = 3/198 (2%) Strand=Plus/Minus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAA 25571 |||||||||||||||||||||||| |||| |||||| ||| |||| || || || Sbjct 2334 CTGGACCGCCGAAGAGATTGATCTCTCCAAAGACATGCACGACTGGGACAACAAATTGAA 2275 Query 25572 ---AGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTAT 25628 |||||| | || || |||| |||| | || |||||||| || || ||||| || Sbjct 2274 CTCTGACGAGAAACACTTCATCAAACACGTCCTCGCCTTCTTTGCCGCATCGGATGGCAT 2215 Query 25629 AGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTG 25688 || |||||||| || ||||| |||| | | ||||| || | || || || Sbjct 2214 CGTCAACGAGAACCTTATTGAGAGGTTCAGCGGCGAAGTCCAAGTGGCCGAAGCACGCTG 2155 Query 25689 TTTCTACGGTTTCCAGAT 25706 |||||| || ||||| || Sbjct 2154 TTTCTATGGATTCCAAAT 2137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928662340049600