Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20sorghi_20[genbank_20GCA_5F001263375.1_202015-08-07] 15,715 sequences; 99,534,058 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq6918 89.7 3e-13 >seq6918 Length=27162 Score = 89.7 bits (98), Expect = 3e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 ||| || | ||| || ||||| | ||||| || | ||||| |||| |||| || || Sbjct 5671 CATGAAGAGATCGGGGATCCAAAGCGCATAGAAAAGATCTCGAGCTCGACTTTCCTCCTT 5730 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 |||||||||||| |||| || || | ||||||| ||| | ||||||||| || | || Sbjct 5731 CCCGTGATTCTTTCTTAGGTCCAACCAGTCAAAAACATCCGCGTGCCATGGCTCAAGGTA 5790 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATC 26099 ||| ||||| ||| ||| || || |||||||| || |||| Sbjct 5791 GATTGCAAAGGCACCAGGTCTCTTATTACCTCCTTGATCAACATATC 5837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252991536118625