Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20sorghi_20[genbank_20GCA_5F001263375.1_202015-08-07] 15,715 sequences; 99,534,058 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq11162 89.7 4e-12 >seq11162 Length=11478 Score = 89.7 bits (98), Expect = 4e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 282671 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTG 282730 ||||| | || || || ||||| | ||| | | || || | || |||| | || Sbjct 2305 CCAATCAGACGCTTGGCGTCAAAGACAGTGTGGTGGGGGTTCATGGCGACTTGGTTCTTC 2246 Query 282731 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 282790 || ||||| || |||||| | || | || |||| | || ||||| ||||| ||||| Sbjct 2245 GCGGCATCACCGATCAGACGCTCGGAGTCATTAAAAGCCACGTATGAGGGAGTGGTGCGG 2186 Query 282791 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 282850 || ||||||||||| | ||| |||||||| |||||||||||||||| || || Sbjct 2185 TTTCCTTGATCATTGGAAATGATTTCAACCCGGTCATTTTGCCATACACCCACGCATGAG 2126 Query 282851 AAAGTTGTTCCTAAATCAATACCAATAGC 282879 | || || || | |||||||| | ||| Sbjct 2125 TAGGTGGTGCCAAGGTCAATACCGACAGC 2097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3739858859911590