Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20sorghi_20[genbank_20GCA_5F001263375.1_202015-08-07] 15,715 sequences; 99,534,058 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq10166 89.7 5e-13 >seq10166 Length=49910 Score = 89.7 bits (98), Expect = 5e-13 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 25195 ATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAA 25254 ||| || |||||| ||||||| | |||||||| || || ||||| || | || || Sbjct 22029 ATTGACAGGAAAAACGATCACTTTGGAAGTCGAGTCCTCTGACACTATTGACAATGTCAA 22088 Query 25255 ACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGG 25314 || ||| || ||||| || || || || || |||||| || | || | | || Sbjct 22089 GGCTAAGATTCAAGACAAAGAAGGAATCCCTCCAGACCAGCAACGATTGATCTTTGCTGG 22148 Query 25315 CAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCAT 25374 ||||||||||||||||| ||| | | ||| ||||| || || ||||| ||||| | Sbjct 22149 CAAACAACTCGAAGATGGGCGAACTCTGGCCGACTACAACATCCAGAAAGAGTCCACTCT 22208 Query 25375 TCATTTAGT 25383 |||||| || Sbjct 22209 TCATTTGGT 22217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445006966768800