Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20sorghi_20[genbank_20GCA_5F001263375.1_202015-08-07] 15,715 sequences; 99,534,058 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq1054 82.4 4e-11 >seq1054 Length=9129 Score = 82.4 bits (90), Expect = 4e-11 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTC 65146 || || ||||| || ||||||||| | || || || ||||| || | ||| || Sbjct 3779 CGAGTACCAAATTGTCCATTTGGCGACAGTACGTTGATGTTGTTGCTTCCGACAAAGTTT 3838 Query 65147 TGAGCCATTCCGATAATTG-CTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATG 65205 ||||| | ||| | ||||| ||| | |||| || ||||| ||||| |||||| | ||||| Sbjct 3839 TGAGCGAGTCCCACAATTGTCTG-AGTTAAGCTTGCTTCGCCGTGGTGATATGCCGAATG 3897 Query 65206 TTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTC 65244 |||||| ||| || | || || ||||| || ||||| Sbjct 3898 TTCAGAACAATAACCTCCCAACTGGGCAACCTTGATTTC 3936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235634861019750