Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20sorghi_20[genbank_20GCA_5F001263375.1_202015-08-07] 15,715 sequences; 99,534,058 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq6918 84.2 2e-11 >seq6918 Length=27162 Score = 84.2 bits (92), Expect = 2e-11 Identities = 169/251 (67%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 79558 TTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATT 79617 |||||||||||||| ||||||||||| || || | || | |||||| ||||| ||| Sbjct 5907 TTGTTGAAAACTCGAAGCATGGGCACAATACCATTGGAGTAGCCGTTGGTCCCAGAGATA 5966 Query 79618 CGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAG 79677 |||| | ||||| || || ||||| |||||| || |||| | ||||||| Sbjct 5967 TAACTACCAGTAGCCCGGATATTGTTAATGTGGAGTCCGATTCCACCGGCACTCTTGGAG 6026 Query 79678 ATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCG 79737 || ||||| || | || || || || || || || || || || | || Sbjct 6027 ATCATAGCGCAAGTTTTCAAGGTGTCATAAATTCCGTCAATTGAATCTGATTTACTGGCA 6086 Query 79738 ACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTC 79797 |||| |||||| ||| | ||||| | || ||||| ||||| || ||||| | Sbjct 6087 ACCAAGAAGCAAGACGAGAGTTGTGGATGAGGAGTTCCGGCATTGAAAAGTGTCGGTGAG 6146 Query 79798 GCGTGCGTGAA 79808 ||||| ||||| Sbjct 6147 GCGTGAGTGAA 6157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548417049159600