Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20sorghi_20[genbank_20GCA_5F001263375.1_202015-08-07] 15,715 sequences; 99,534,058 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq10166 113 4e-20 >seq10166 Length=49910 Score = 113 bits (124), Expect = 4e-20 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||||||| |||||| ||| ||||| |||||||| || || || ||||| |||| ||| Sbjct 22507 ACCAAATGGAGCGTGGACTCCTTTTGGATATTATAGTCCGCCAGAGTTCGACCGTCTTCA 22448 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCC 39192 || |||||||||||||| || ||||| |||||||| | ||| | || ||||||||| Sbjct 22447 AGTTGTTTGCCCGCAAAGATGAGACGTTGCTGGTCCGGGGGGATGCCTTCTTTGTCC 22391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429463330607795