Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20sorghi_20[genbank_20GCA_5F001263375.1_202015-08-07] 15,715 sequences; 99,534,058 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq6413 87.8 2e-12 >seq6413 Length=7563 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 155876 AATTTGAAGACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCGCCC 155935 |||||| | || || || ||||||||||| || || || | | ||| || || || Sbjct 3672 AATTTGTAACCGTCCATTCTCATCGGGTAAGGAGATCTCCATGTGGACTTCTAATCGACC 3731 Query 155936 AGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAAT 155995 |||| | || || || ||||| | ||| | || ||||| || ||||||| ||| Sbjct 3732 TGGTCGGAGCAAAGCCTCATCAATCATGTCCAACCGATTCGTCATTCCGATGATTAGAAT 3791 Query 155996 GTTGTTTAAAGATTCTACACCGTCTATTTTAGACAATAATTGATTGACTACGGCGTCG 156053 ||||||||| || || ||||| ||||| |||| | ||||||||| |||| |||| Sbjct 3792 GTTGTTTAATTGATCGACTCCGTCCATTTTTGACAGCAGTTGATTGACGACGGAGTCG 3849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666944161415400