Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008925.1_202017-03-01] 22,208 sequences; 65,184,451 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq5954 86.0 1e-11 >seq5954 Length=8855 Score = 86.0 bits (94), Expect = 1e-11 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 61079 TCGAATTTGTCAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAAC 61138 |||| | | |||||| || || || ||||| ||||| |||||| |||| ||||||||| Sbjct 2850 TCGATTCTATCAAGCTTCTACTTCCGAACTTTATGGTAAAGTTATCGAAACTCCTCAAAC 2909 Query 61139 AGAAAGGACTCCGTTTTATCCTCGTAGCCCGTATGGTGTTGCAAAACTATACGCTTA 61195 |||| ||||| || |||||| | || ||||||||||| || ||||||| || Sbjct 2910 TGAAAATACTCCTTTCTATCCTAGATCTCCTTATGGTGTTGCTAAGTTATACGCGTA 2966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057523006759040