Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008925.1_202017-03-01]
22,208 sequences; 65,184,451 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq10000 87.8 2e-12
>seq10000
Length=7706
Score = 87.8 bits (96), Expect = 2e-12
Identities = 123/170 (72%), Gaps = 2/170 (1%)
Strand=Plus/Minus
Query 63979 CATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGAT 64038
|||| || | | ||| || || || | ||| || || || || || || ||||| ||||
Sbjct 3824 CATAAGTGTAAAGATCTTCGATAACCTGACTGAAGAGCTTCTTAGTCTCTTTGTGAAGAT 3765
Query 64039 TTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-G 64097
| || || || ||||| ||||| | ||||||||||||||| | || || || ||
Sbjct 3764 TGCTGATTGCGATCCTGGCAGCTAGGACGGCATAATCCGGATGGCGAGTGGT-CATGTAA 3706
Query 64098 GCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATT 64147
|| || |||| ||||||| |||||||||| ||||| || || |||||
Sbjct 3705 GCAGCGGTTTCAGCTGCCAAGTTGTCCAATTCGACCGTGGTGACACCATT 3656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629642762634240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |