Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008925.1_202017-03-01] 22,208 sequences; 65,184,451 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq5954 96.9 6e-15 >seq5954 Length=8855 Score = 96.9 bits (106), Expect = 6e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 193674 CATGTTAAAGTTTCCTTTGAGATGCCAGAGTATACTTCTAATGTTGATGCTTTAGGAACT 193733 ||||| ||||| || ||||| ||| | || ||||| |||| |||| |||||||| Sbjct 2743 CATGTGAAAGTCTCGTTTGATATGGCCGAATATACAGGGGATGTAGATGGATTAGGAACC 2802 Query 193734 CTTAGAATACTTGAAGCAGTTCGTATGTTGGGAATGGAGAAAGATGTTCGCATCTATCAG 193793 | ||| || | || || |||| | || || | ||| ||||||| ||||||| Sbjct 2803 TTAAGATTATTAGACGCCATTCGAACGTGTGGTCTTACTAAACATGTTCGATTCTATCAA 2862 Query 193794 GCATCTACCAGCGAACTGTATGGTGGTGTTCTAGGCACTCCACTATCAGAAACCACACCA 193853 || ||||| |||||| |||||| ||| | | ||||| | | | |||| || || Sbjct 2863 GCTTCTACTTCCGAACTTTATGGTAAAGTTATCGAAACTCCTCAAACTGAAAATACTCCT 2922 Query 193854 TTTCATCCACGCTCTCCTTATGGTGTAGCAAAGTTGTA 193891 || |||| | |||||||||||||| || ||||| || Sbjct 2923 TTCTATCCTAGATCTCCTTATGGTGTTGCTAAGTTATA 2960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807331022676480