Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008925.1_202017-03-01] 22,208 sequences; 65,184,451 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq23 91.5 2e-13 >seq23 Length=7809 Score = 91.5 bits (100), Expect = 2e-13 Identities = 107/143 (75%), Gaps = 4/143 (3%) Strand=Plus/Minus Query 21584 CCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGAT 21643 ||||| ||||| ||||| ||||| ||||||||||| | |||||||| ||| | |||||| Sbjct 2638 CCTGAGAAGAAGATGCCTTCAACTGCAGCAAATGCGATCAATCGTTCTCCGAACGTAGAT 2579 Query 21644 TCTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTT--TAATACAATCAATTG 21701 | || ||| | ||||| | |||||| | ||| |||||| ||||||| |||| Sbjct 2578 TTCTTGTCCGAGATCCACGTCAATGCCCAGTCTGC--TTTCTTGCGAATACAAGGGATTG 2521 Query 21702 TATCAATAGCTTTTAAAAGATGA 21724 |||| || || | || |||||| Sbjct 2520 TATCGATTGCCTCGAACAGATGA 2498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531753144337920