Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008925.1_202017-03-01] 22,208 sequences; 65,184,451 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq10000 95.1 2e-14 >seq10000 Length=7706 Score = 95.1 bits (104), Expect = 2e-14 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 63783 CATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGAT 63842 |||| || | | ||| || || || | ||| || || || || || |||||||| |||| Sbjct 3824 CATAAGTGTAAAGATCTTCGATAACCTGACTGAAGAGCTTCTTAGTCTCTTTGTGAAGAT 3765 Query 63843 T--TGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT 63900 | |||| || || || || ||||| | ||||||||||||||| | || || || || Sbjct 3764 TGCTGATT--GCGATCCTGGCAGCTAGGACGGCATAATCCGGATGGCGAGTGGT-CATGT 3708 Query 63901 -GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATATTC 63959 || || |||| ||||||| |||||||||| ||||| || |||||||| | | | Sbjct 3707 AAGCAGCGGTTTCAGCTGCCAAGTTGTCCAATTCGACCGTGGTGACACCATTGAAAACAC 3648 Query 63960 CTTGGATAACCTTC 63973 | | |||||| ||| Sbjct 3647 CATTGATAACTTTC 3634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633456103756800