Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008925.1_202017-03-01] 22,208 sequences; 65,184,451 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq12085 89.7 4e-13 seq4594 84.2 2e-11 >seq12085 Length=636 Score = 89.7 bits (98), Expect = 4e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 |||||||| | ||||||||||||||||| ||||| ||||| |||| | || |||| Sbjct 624 ACCAACAGCGCCTTATCTTTGCTGGCAAGCAACTCGAAGACGGCCGAACTCTTGCTGATT 565 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||| ||||||||||| || || |||||| | || | ||| | ||||| || Sbjct 564 ACAACATTCAGAAGGAGTCCACCCTTCATCTAGTCCTCCGTCTCCGAGGTGG 513 >seq4594 Length=2528 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 |||||| | || ||||||||||| || ||||| || ||| |||| ||||| ||||| Sbjct 1131 CAACAGCGTCTAATCTTTGCTGGAAAGCAACTTGAGGATGGTCGAACTTTGGCCAATTAC 1072 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 || ||||| ||||| || || |||||| |||| | ||| | ||||| ||| Sbjct 1071 AACATTCAAAAGGAGTCCACCCTTCATTTGGTTCTCCGTCTCCGAGGTGGA 1021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358027869941632