Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008925.1_202017-03-01] 22,208 sequences; 65,184,451 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq6802 93.3 5e-14 >seq6802 Length=11516 Score = 93.3 bits (102), Expect = 5e-14 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 154971 GGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAG-TATGGTGCAGATGT 155029 || || ||| | ||||||||| | ||| || |||| ||| |||| | ||| |||||||| Sbjct 964 GGTGCCAATATGAATGCACAGATCGGATTAACAAATCCA-GTGAAATGTGGAGCAGATGT 906 Query 155030 ATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGT 155089 |||||| ||||| |||| || || || | || || |||||||| ||||| || || || Sbjct 905 ATGTCACTTAAACCTACACAAGACCTTTGGAATACCGCATGGAGGAGGAGGACCAGGAGT 846 Query 155090 AGGTCCTATAGGTGTAGC 155107 ||| || || || ||||| Sbjct 845 AGGACCGATCGGAGTAGC 828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579052010526720