Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008925.1_202017-03-01] 22,208 sequences; 65,184,451 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq6802 98.7 1e-15 >seq6802 Length=11516 Score = 98.7 bits (108), Expect = 1e-15 Identities = 106/138 (77%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 159646 GGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGAC-TATGGTGCAGATGT 159704 ||||| ||| | ||||||||| | || || |||| ||| |||| | ||| |||||||| Sbjct 964 GGTGCCAATATGAATGCACAGATCGGATTAACAAATCCA-GTGAAATGTGGAGCAGATGT 906 Query 159705 ATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGT 159764 |||||| ||||| |||| ||||| || | || || |||||||| ||||| || || || Sbjct 905 ATGTCACTTAAACCTACACAAGACCTTTGGAATACCGCATGGAGGAGGAGGACCAGGAGT 846 Query 159765 AGGTCCTATTGGTGTAGC 159782 ||| || || || ||||| Sbjct 845 AGGACCGATCGGAGTAGC 828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587887956986880