Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008925.1_202017-03-01] 22,208 sequences; 65,184,451 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq4594 82.4 5e-11 >seq4594 Length=2528 Score = 82.4 bits (90), Expect = 5e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| || | |||| || ||||| ||||| ||||| | ||| | || | || || Sbjct 1327 ACCAAATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCTTCA 1386 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || |||||||||||||| || || ||||| |||||| | || | ||||||||||| Sbjct 1387 AGTTGTTTTCCGGCAAAGATGAGACGTTGTTGGTCTGGAGGAATGCCCTCCTTGTCTTGG 1446 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || | |||||| || | || ||||| ||| Sbjct 1447 ATCTTAGCCTTGACGTTGTCAATAGTATCGGACGACTCAACTTCCAAAGTGATGGTCTTT 1506 Query 34953 CCCGTGAG 34960 || ||||| Sbjct 1507 CCTGTGAG 1514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324545734669824