Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008925.1_202017-03-01] 22,208 sequences; 65,184,451 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq6802 93.3 5e-14 >seq6802 Length=11516 Score = 93.3 bits (102), Expect = 5e-14 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 138180 GCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTA 138239 ||||| || || || ||||| || || ||||| |||||||| || || | || ||||| Sbjct 828 GCTACTCCGATCGGTCCTACTCCTGGTCCTCCTCCTCCATGCGGTATTCCAAAGGTCTTG 887 Query 138240 TGTAAATTTAGATGACATACATCTGCACCATA-GTCACATGGTTTTGCTAGACCTACCTG 138298 |||| |||| |||||||||||||| ||| | |||| ||| |||| || || | ||| Sbjct 888 TGTAGGTTTAAGTGACATACATCTGCTCCACATTTCAC-TGGATTTGTTAATCCGATCTG 946 Query 138299 TGCATTTAGATTTGCACC 138316 |||||| | ||| ||||| Sbjct 947 TGCATTCATATTGGCACC 964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578837670044160