Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008935.1_202017-03-01] 24,639 sequences; 68,656,445 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq13340 86.0 4e-12 >seq13340 Length=1591 Score = 86.0 bits (94), Expect = 4e-12 Identities = 135/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 34180 CACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC-AGCTGACGGTCGTCGT 34238 ||| || || ||||| || ||||| ||||||||||||| | || || ||| |||| | Sbjct 240 CACGAGATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTG-CGGCCGTCTT 298 Query 34239 CCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGG 34298 |||||||||| || || || || | ||||| || || ||| | | |||||||| Sbjct 299 CCAACTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGGGGAATACCTTCCTTGTCTT 358 Query 34299 CTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTT 34358 |||||| ||| | | | | || | |||| || ||||| || | |||||||| | Sbjct 359 GGATCTTTGCCTTGACGTTGTCAATGGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCT 418 Query 34359 TGCCGGTGAGA 34369 ||||||| ||| Sbjct 419 TGCCGGTAAGA 429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322974985415840