Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008935.1_202017-03-01] 24,639 sequences; 68,656,445 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq14918 104 5e-17 >seq14918 Length=13598 Score = 104 bits (114), Expect = 5e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 115402 ATCGCACATCTGCTCTGAATCGGTTCGATGATTTTGGTGGAGTTGTTGCAGACTATGATG 115461 ||||||||||| ||||| |||||||||||||| ||| | || ||||| || | | | Sbjct 2223 ATCGCACATCTACTCTGGATCGGTTCGATGATCTTGCTCGAATTGTTACATGCAAGTGCG 2164 Query 115462 AACCGCGTCGTGCTCGAGTAAACATCCATGATCCGTCGCAGCGCCTGGAAAGCACCAGGT 115521 ||||| ||||| | || || | ||||| | ||||||||||| || ||||| | | Sbjct 2163 AACCGAGTCGTATTTGAATATATCTCCATCGTTCGTCGCAGCGCTTGTTGGGCACCGGCT 2104 Query 115522 GTCATCGAGTCTGCCTCGTCGAGAACGACAATCTT 115556 |||||||| || ||||| ||||| | || ||||| Sbjct 2103 GTCATCGAATCGGCCTCATCGAGGATGATTATCTT 2069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073427425705152