Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008935.1_202017-03-01] 24,639 sequences; 68,656,445 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq13340 82.4 8e-11 seq13338 82.4 8e-11 >seq13340 Length=1591 Score = 82.4 bits (90), Expect = 8e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || ||| || |||| |||||| | ||| |||||| Sbjct 253 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCTTCCAACTGCTTACCA 312 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||||| || || ||||| || || || ||||| ||||| ||| ||| || Sbjct 313 GCAAAGATCAATCGCTGTTGATCAGGGGGAATACCTTCCTTGTCTTGGATCTTTGCCTTG 372 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 | | || | ||||||| | ||| ||||||| || | ||||||||||| Sbjct 373 ACGTTGTCAATGGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCGGT 425 >seq13338 Length=675 Score = 82.4 bits (90), Expect = 8e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | || | ||| || |||| ||||||||||| |||||||| || ||| Sbjct 227 CCTCCTCGAAGTCGGAGAACCAAATGAAGGGTAGACTCTTTCTGAATGTTGTAGTCGGCA 286 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | |||||| | |||||||| ||| |||| |||||||| ||||| || || Sbjct 287 AGGGTACGACCGTCTTCCAATTGTTTACCGGCAAAGATTAGACGTTGTTGATCTGGGGGG 346 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||| || || ||| || ||| | | || | ||||| | | ||||| Sbjct 347 ATTCCTTCCTTATCTTGGATCTTAGCTTTGACGTTATCAATCGTGTCCGACGATTCCACT 406 Query 139718 TCAACGGTCACCGTCTTGCCGGT 139740 || | || | |||||| ||||| Sbjct 407 TCCAGAGTGATCGTCTTACCGGT 429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495911218488800