Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008935.1_202017-03-01] 24,639 sequences; 68,656,445 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq13338 82.4 6e-11 >seq13338 Length=675 Score = 82.4 bits (90), Expect = 6e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 |||| |||||||||||| || || || ||||||||||| ||| ||| ||||||| Sbjct 531 ACTAGATGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCAAGAGTTCGGCCGTCTTCG 590 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | ||| |||||||| | || | || |||||||| ||||| ||||| ||||| | Sbjct 591 AGTTGCTTGCCAGCAAAGATAAGGCGCTGTTGGTCCGGGGGAATACCTTCCTTGTCTTGA 650 Query 15275 ATTTTGCTCTTTACAATTTCTAT 15297 || ||| ||| ||| | || || Sbjct 651 ATCTTGGCCTTCACATTCTCAAT 673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362070442000299