Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008935.1_202017-03-01] 24,639 sequences; 68,656,445 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq20 91.5 2e-13 >seq20 Length=7811 Score = 91.5 bits (100), Expect = 2e-13 Identities = 107/143 (75%), Gaps = 4/143 (3%) Strand=Plus/Minus Query 21584 CCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGAT 21643 ||||| ||||| ||||| ||||| ||||||||||| | |||||||| ||| | |||||| Sbjct 2643 CCTGAGAAGAAGATGCCTTCAACTGCAGCAAATGCGATCAATCGTTCTCCGAACGTAGAT 2584 Query 21644 TCTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTT--TAATACAATCAATTG 21701 | || ||| | ||||| | |||||| | ||| |||||| ||||||| |||| Sbjct 2583 TTCTTGTCCGAGATCCACGTCAATGCCCAGTCTGC--TTTCTTGCGAATACAAGGGATTG 2526 Query 21702 TATCAATAGCTTTTAAAAGATGA 21724 |||| || || | || |||||| Sbjct 2525 TATCGATTGCCTCGAACAGATGA 2503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531736981202360