Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008935.1_202017-03-01] 24,639 sequences; 68,656,445 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq20 141 1e-28 >seq20 Length=7811 Score = 141 bits (156), Expect = 1e-28 Identities = 159/212 (75%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 93416 ATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCT 93475 |||||||| ||||||||||||| |||||| | ||| || |||||| | ||| ||||| Sbjct 2356 ATTTGGAAGCCGTAGAAACATCGAGCTTCAGCGATTTGAACTTCTCCACTAAACCTCTCG 2297 Query 93476 ACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATA 93535 | ||| || || ||||| || |||||||| || ||||| ||||| | | ||| || || Sbjct 2296 ATGAGGTTCTCGTTGACGATCCCATCGGAGGCAGCAAAGAAAGCGAGGACATGTTTGATG 2237 Query 93536 AAATGTTTCTCATCATCTTTAAGC---TTATCCCAATCGGATAGATCTTTTGAAAGATCG 93592 || |||||||| || | || | | |||||||| ||| | ||| || || |||||| Sbjct 2236 AAGTGTTTCTCGTCCCCATTCAACTTATTATCCCAGTCGTGCATATCCTTCGACAGATCG 2177 Query 93593 ACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 | ||| ||| | |||||||| || ||||| || Sbjct 2176 ATTTCCTCGGCTGTCCAAAAGGAAGCTTCGGC 2145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556689293834360