Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008935.1_202017-03-01] 24,639 sequences; 68,656,445 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq3966 107 1e-17 >seq3966 Length=13626 Score = 107 bits (118), Expect = 1e-17 Identities = 124/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 518540 GGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAAT 518599 || || || || |||| | ||||| ||||| || |||||| |||||| || || || Sbjct 4338 GGGTTCATGGCGACTTGGTTCTTGGCGGCATCACCGATCAGACGTTCTGAGTCGGTGAAA 4279 Query 518600 GAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCA 518659 | ||| || || |||||||| ||||| ||||| || || ||||| || |||||| | || Sbjct 4278 GCAACGTAGGAAGGAGTTGTTCGATTTCCTTGGTCGTTGGCAATGATCTCAACTCGATCA 4219 Query 518660 TTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACC 518706 |||||||||||||| || || | || || || | ||||||||| Sbjct 4218 TTTTGCCATACACCAACGCAGGAGTAGGTGGTACCGAGATCAATACC 4172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3779599731659134