Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008935.1_202017-03-01] 24,639 sequences; 68,656,445 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq7574 98.7 1e-15 >seq7574 Length=17703 Score = 98.7 bits (108), Expect = 1e-15 Identities = 106/138 (77%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 154971 GGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAG-TATGGTGCAGATGT 155029 || || ||| | ||||||||| | ||| || |||| ||| |||| | ||| |||||||| Sbjct 1423 GGTGCCAATATGAATGCACAGATCGGATTAACAAATCCA-GTGAAATGTGGAGCAGATGT 1365 Query 155030 ATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGT 155089 |||||| ||||| |||| || || || |||| || |||||||| ||||| || || || Sbjct 1364 ATGTCACTTAAACCTACACAAGACCTTTGGTATACCGCATGGAGGAGGAGGACCAGGAGT 1305 Query 155090 AGGTCCTATAGGTGTAGC 155107 ||| || || || ||||| Sbjct 1304 AGGACCGATCGGAGTAGC 1287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579034409697760