Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008935.1_202017-03-01] 24,639 sequences; 68,656,445 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq7574 98.7 1e-15 >seq7574 Length=17703 Score = 98.7 bits (108), Expect = 1e-15 Identities = 106/138 (77%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 138180 GCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTA 138239 ||||| || || || ||||| || || ||||| |||||||| || |||| || ||||| Sbjct 1287 GCTACTCCGATCGGTCCTACTCCTGGTCCTCCTCCTCCATGCGGTATACCAAAGGTCTTG 1346 Query 138240 TGTAAATTTAGATGACATACATCTGCACCATA-GTCACATGGTTTTGCTAGACCTACCTG 138298 |||| |||| |||||||||||||| ||| | |||| ||| |||| || || | ||| Sbjct 1347 TGTAGGTTTAAGTGACATACATCTGCTCCACATTTCAC-TGGATTTGTTAATCCGATCTG 1405 Query 138299 TGCATTTAGATTTGCACC 138316 |||||| | ||| ||||| Sbjct 1406 TGCATTCATATTGGCACC 1423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578820075730280