Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008935.1_202017-03-01] 24,639 sequences; 68,656,445 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq18889 91.5 2e-13 >seq18889 Length=13283 Score = 91.5 bits (100), Expect = 2e-13 Identities = 114/154 (74%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 194239 ATACCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCTCAAAAAGGAACTTGTGGTAT 194297 |||||||||| || |||||||| ||| || |||| || || || ||| ||| || Sbjct 69 ATACCTGAAACTGGAGATAAATTCGCTTCTAGACATGGA-CAGAAGGGGACTGTTGGGAT 127 Query 194298 GATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTAT 194357 | ||| |||||||||||||||||| ||| || ||| || || ||||||||||| Sbjct 128 TCTGTATAGACAAGAAGATATGCCATTCACATCTGAAGGAATTTGTCCGGATATTATTAT 187 Query 194358 CAATCCAAATTGTATTCCGTCCAGAATGACCATT 194391 |||||| || ||||| ||| ||||||| ||| Sbjct 188 CAATCCTCATGCGATTCCATCCCGAATGACGATT 221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632294801109320