Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008935.1_202017-03-01] 24,639 sequences; 68,656,445 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq5107 84.2 2e-11 >seq5107 Length=2524 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/188 (70%), Gaps = 1/188 (1%) Strand=Plus/Minus Query 107565 TTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACTGTC 107624 ||| ||| | | ||| |||| || ||||| ||| | ||| ||| | |||||| || Sbjct 2102 TTTCTCACAGCCTTA-CAGGAAAGACCATCACCCTTGAAGTCGAGTCCTCCGATACCATC 2044 Query 107625 GGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTT 107684 | | | || || ||||| ||||| || ||| | ||| |||||| ||| | ||| Sbjct 2043 GACAATGTCAAGGCCAAGATCCAAGATAAGGAGGGCATTCCCCCGGATCAACAGCGTCTT 1984 Query 107685 ATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAAG 107744 || | ||| || || || || ||||||| | ||| | || || ||||||||||| ||| Sbjct 1983 ATCTTTGCCGGCAAGCAACTTGAGGACGGCCGAACCCTTGCTGATTACAACATTCAGAAG 1924 Query 107745 GAGTCTAC 107752 |||||||| Sbjct 1923 GAGTCTAC 1916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398757022158271