Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008935.1_202017-03-01] 24,639 sequences; 68,656,445 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq3966 107 1e-17 >seq3966 Length=13626 Score = 107 bits (118), Expect = 1e-17 Identities = 116/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 282720 CTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATG 282779 |||| | ||||| ||||| || |||||| |||||| || || || | ||| || || | Sbjct 4325 CTTGGTTCTTGGCGGCATCACCGATCAGACGTTCTGAGTCGGTGAAAGCAACGTAGGAAG 4266 Query 282780 GAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACAC 282839 ||||||| ||||| ||||| || || ||||| || |||||| | ||||||||||||||| Sbjct 4265 GAGTTGTTCGATTTCCTTGGTCGTTGGCAATGATCTCAACTCGATCATTTTGCCATACAC 4206 Query 282840 CTACACAACTAAAAGTTGTTCCTAAATCAATACC 282873 | || || | || || || | ||||||||| Sbjct 4205 CAACGCAGGAGTAGGTGGTACCGAGATCAATACC 4172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3739420729224414