Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008935.1_202017-03-01] 24,639 sequences; 68,656,445 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq9794 89.7 7e-12 >seq9794 Length=4462 Score = 89.7 bits (98), Expect = 7e-12 Identities = 90/116 (78%), Gaps = 6/116 (5%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||| || || ||||| |||||| |||| | ||| ||||||||| || Sbjct 3400 ATCTACAAGGTCCTTAAACAGGTTCACCCCGACACCGGT-----ATC-TCCAACAAGGCC 3453 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGC 725026 |||| |||||||||||| || || |||||||| |||| || |||| ||||| || Sbjct 3454 ATGTTGATCATGAACTCTTTCGTTAACGACATCTTCGAGCGAATCGCAACCGAAGC 3509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7175434723163518