Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008935.1_202017-03-01] 24,639 sequences; 68,656,445 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq6675 87.8 3e-12 >seq6675 Length=9441 Score = 87.8 bits (96), Expect = 3e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 160976 GGTATAACTGGGCAGGATGGATCCTATCTTGCTGAACTTCTACTGAAGAAGGGGTATGAA 161035 ||||| ||||| || |||||||| |||||| ||||||| |||| | |||||||| ||| Sbjct 2422 GGTATTACTGGACAAGATGGATCTTATCTTACTGAACTCTTACTCGAAAAGGGGTACGAA 2481 Query 161036 GTCCATGGTATTATTCGTAGAACCTCCTCGTTTAATACAGGAAGAATCGATCATATCT 161093 || ||||| |||| | | | || |||||||| ||||||||||| ||| ||| Sbjct 2482 GTACATGGACTTATCAGACGTTCATCAAGTTTTAATACCGGAAGAATCGAACATCTCT 2539 Score = 87.8 bits (96), Expect = 3e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 161560 AGGACTACAGGATTGTCTATACCTAGGTAATCTAAACTCAAGACGAGATTGGGGTCATGC 161619 ||||| ||| || ||| ||||| |||| ||| | ||| |||||||||||| ||||| Sbjct 3253 AGGACAACAAGAATGTTTATACTTAGGAAATTTGTCAGCAAAACGAGATTGGGGCCATGC 3312 Query 161620 TGAAGACTATGTGGAGGCTATGTGGTTGATGTTACAACAGGAAACTCCTGATGACTATGT 161679 |||| ||||| |||| ||||||| |||||||||||| || || ||||| | || Sbjct 3313 CAAAGATTATGTAGAGGGTATGTGGAAGATGTTACAACAAGATCAACCGGATGATTTCGT 3372 Query 161680 GATTGCCACAGGTAAA 161695 |||| || ||| || Sbjct 3373 ACTTGCTACTGGTGAA 3388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729704790807320