Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008935.1_202017-03-01] 24,639 sequences; 68,656,445 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq20 86.0 5e-12 >seq20 Length=7811 Score = 86.0 bits (94), Expect = 5e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 4539 AACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAA 4598 || |||| |||||||||||| || || ||||| ||||| || |||||||| || Sbjct 2826 AATAATAGACACGCAAAATCGGTGTGTAATCCTTCATCTCTTGAGATTAGTTCGTTCGAG 2767 Query 4599 AACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCA 4658 ||||||| || |||||||| |||||||| || ||||| || || | || ||||| || Sbjct 2766 AACGTTAGGCCCGGCATTAATCCTCTCTTCTTTAGCCAGAAAATCGATGCGAATGATCCT 2707 Query 4659 GAAAA 4663 | ||| Sbjct 2706 GTAAA 2702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426921362209787