Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008965.1_202017-03-01] 20,258 sequences; 69,592,563 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq12058 104 5e-17 >seq12058 Length=13593 Score = 104 bits (114), Expect = 5e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 115402 ATCGCACATCTGCTCTGAATCGGTTCGATGATTTTGGTGGAGTTGTTGCAGACTATGATG 115461 ||||||||||| ||||| |||||||||||||| ||| | || ||||| || | | | Sbjct 2218 ATCGCACATCTACTCTGGATCGGTTCGATGATCTTGCTCGAATTGTTACATGCAAGTGCG 2159 Query 115462 AACCGCGTCGTGCTCGAGTAAACATCCATGATCCGTCGCAGCGCCTGGAAAGCACCAGGT 115521 ||||| ||||| | || || | ||||| | ||||||||||| || ||||| | | Sbjct 2158 AACCGAGTCGTATTTGAATATATCTCCATCGTTCGTCGCAGCGCTTGTTGGGCACCGGCT 2099 Query 115522 GTCATCGAGTCTGCCTCGTCGAGAACGACAATCTT 115556 |||||||| || ||||| ||||| | || ||||| Sbjct 2098 GTCATCGAATCGGCCTCATCGAGGATGATTATCTT 2064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073487697890944