Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008965.1_202017-03-01] 20,258 sequences; 69,592,563 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq4123 96.9 3e-15 >seq4123 Length=2531 Score = 96.9 bits (106), Expect = 3e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || ||| ||||||||| |||||||||||| || |||| |||| || Sbjct 1327 ACCAAATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCTTCA 1386 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243 |||||||||||||| || || | || |||||||| ||||| | ||||||||||| Sbjct 1387 AGTTGTTTTCCGGCAAAGATGAGACGTTGTTGGTCTGGAGGAATGCCCTCCTTGTC 1442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394977658155418