Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008965.1_202017-03-01] 20,258 sequences; 69,592,563 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq4123 84.2 2e-11 >seq4123 Length=2531 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/188 (70%), Gaps = 1/188 (1%) Strand=Plus/Plus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 ||||||||||| ||||| |||||||| || | ||| | ||||||| || || || || Sbjct 1917 GTAGACTCCTTCTGAATGTTGTAATCAGCAAGGGTTCGGCCGTCCTCAAGTTGCTTGCCG 1976 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 ||| | ||||| | ||| |||||| ||| | |||||| || || || || || Sbjct 1977 GCAAAGATAAGACGCTGTTGATCCGGGGGAATGCCCTCCTTATCTTGGATCTTGGCCTTG 2036 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024 || | | ||| |||||| | ||| ||||| ||| ||||| || |||| ||| | | Sbjct 2037 ACATTGTCGATGGTATCGGAGGACTCGACTTCGAGGGTGATGGTCTTTCCTG-TAAGGCT 2095 Query 19025 TTGACAAA 19032 ||| ||| Sbjct 2096 GTGAGAAA 2103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414470444307652