Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008965.1_202017-03-01] 20,258 sequences; 69,592,563 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq19 91.5 2e-13 >seq19 Length=17389 Score = 91.5 bits (100), Expect = 2e-13 Identities = 107/143 (75%), Gaps = 4/143 (3%) Strand=Plus/Minus Query 21584 CCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGAT 21643 ||||| ||||| ||||| ||||| ||||||||||| | |||||||| ||| | |||||| Sbjct 12223 CCTGAGAAGAAGATGCCTTCAACTGCAGCAAATGCGATCAATCGTTCTCCGAACGTAGAT 12164 Query 21644 TCTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTT--TAATACAATCAATTG 21701 | || ||| | ||||| | |||||| | ||| |||||| ||||||| |||| Sbjct 12163 TTCTTGTCCGAGATCCACGTCAATGCCCAGTCTGC--TTTCTTGCGAATACAAGGGATTG 12106 Query 21702 TATCAATAGCTTTTAAAAGATGA 21724 |||| || || | || |||||| Sbjct 12105 TATCGATTGCCTCGAACAGATGA 12083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531766109419920