Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008965.1_202017-03-01] 20,258 sequences; 69,592,563 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq6099 93.3 5e-14 >seq6099 Length=17719 Score = 93.3 bits (102), Expect = 5e-14 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 159646 GGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGAC-TATGGTGCAGATGT 159704 ||||| ||| | ||||||||| | || | |||| ||| |||| | ||| |||||||| Sbjct 1420 GGTGCCAATATGAATGCACAGATCGGGTTGACAAATCCA-GTGAAATGTGGAGCAGATGT 1362 Query 159705 ATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGT 159764 |||||| ||||| |||| ||||| || | || || |||||||| ||||| || || || Sbjct 1361 ATGTCACTTAAACCTACACAAGACCTTTGGAATACCGCATGGAGGAGGAGGACCAGGAGT 1302 Query 159765 AGGTCCTATTGGTGTAGC 159782 ||| || || || ||||| Sbjct 1301 AGGACCGATCGGAGTAGC 1284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587902290734880