Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008965.1_202017-03-01] 20,258 sequences; 69,592,563 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq6099 89.7 6e-13 >seq6099 Length=17719 Score = 89.7 bits (98), Expect = 6e-13 Identities = 104/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 138180 GCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTA 138239 ||||| || || || ||||| || || ||||| |||||||| || || | || ||||| Sbjct 1284 GCTACTCCGATCGGTCCTACTCCTGGTCCTCCTCCTCCATGCGGTATTCCAAAGGTCTTG 1343 Query 138240 TGTAAATTTAGATGACATACATCTGCACCATA-GTCACATGGTTTTGCTAGACCTACCTG 138298 |||| |||| |||||||||||||| ||| | |||| ||| |||| | || | ||| Sbjct 1344 TGTAGGTTTAAGTGACATACATCTGCTCCACATTTCAC-TGGATTTGTCAACCCGATCTG 1402 Query 138299 TGCATTTAGATTTGCACC 138316 |||||| | ||| ||||| Sbjct 1403 TGCATTCATATTGGCACC 1420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578851783130160