Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008965.1_202017-03-01] 20,258 sequences; 69,592,563 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq5367 104 3e-17 >seq5367 Length=14932 Score = 104 bits (114), Expect = 3e-17 Identities = 99/127 (78%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847 || || |||| ||||||||||| |||| |||||||| | ||| ||||||| |||| Sbjct 3378 CCAGTAGCAAGTACAAAATCATCCGGTTGATCTTGTTGTAACATCTTCCACATACCCTCT 3319 Query 47848 ACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAG 47907 ||||||||| ||||||| ||||| || || ||| | |||||||| ||||||||| Sbjct 3318 ACATAATCTTTGGCATGGCCCCAATCTCGCTTTGCTGATAAATTTCCTAAATATAAACAT 3259 Query 47908 TCTTGCT 47914 ||||||| Sbjct 3258 TCTTGCT 3252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665325880180560