Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoctonia_20solani_20[genbank_20GCA_5F001286725.1_202015-08-31] 2,065 sequences; 56,028,462 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 9e-12 >seq2 Length=528078 Score = 86.0 bits (94), Expect = 9e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| |||||| | || || || || || || || || || | ||| | || | Sbjct 318163 AATGCAGATATTTGTCAAAACTCTCACCGGAAAGACGATCACCCTCGAGGTGGAGTCTTC 318104 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || || ||| | || |||||||||||||| || || || || || || || Sbjct 318103 TGACACCATCGACAATGTCAAGGCCAAAATTCAAGATAAGGAGGGAATTCCTCCCGACCA 318044 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | || ||||| || || ||||| | ||||| | |||| || |||||||| Sbjct 318043 ACAGCGCCTCATTTTCGCTGGTAAACAGCTCGAGGACGGGAGAACCTTGTCCGATTATAA 317984 Query 124718 TATTCAAAAAGAATCAACTTTGCAT 124742 |||||||| ||||| || |||||| Sbjct 317983 CATTCAAAAGGAATCCACCTTGCAT 317959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755436499792000