Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoctonia_20solani_20[genbank_20GCA_5F001286725.1_202015-08-31] 2,065 sequences; 56,028,462 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1112 91.5 2e-13 >seq1112 Length=1085269 Score = 91.5 bits (100), Expect = 2e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 125418 GCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCG 125477 ||||| | || || ||||| || || || ||||| |||||||| || ||| ||||| Sbjct 231332 GCCGAGCGTCTCGTCGCATTTGCTGCGGTCGAGGGTATCTTCTTCTCCGGTTCCTTTGCT 231391 Query 125478 GCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTT 125537 | || || |||||||||||||||||| | ||||| || ||||| | ||||| | Sbjct 231392 TCTATTTTCTGGCTCAAGAAGCGCGGATTGATGCCTGGCCTGACATTCTCCAACGAACTG 231451 Query 125538 ATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572 || ||||| |||||||| | ||| || ||||| Sbjct 231452 ATCTCTCGTGACGAGGGAATGCACACCGATTTTGC 231486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741040071409400