Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoctonia_20solani_20[genbank_20GCA_5F001286725.1_202015-08-31] 2,065 sequences; 56,028,462 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 seq1955 89.7 5e-13 >seq2 Length=528078 Score = 107 bits (118), Expect = 2e-18 Identities = 148/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | ||||| ||||| | || ||||| |||||||| |||| | || || Sbjct 318163 AATGCAGATATTTGTCAAAACTCTCACCGGAAAGACGATCACCCTCGAGGTGGAGTCTTC 318104 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||||||||| | ||||| || ||| || || || || || |||||||| || Sbjct 318103 TGACACCATCGACAATGTCAAGGCCAAAATTCAAGATAAGGAGGGAATTCCTCCCGACCA 318044 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| | ||||||| || || ||||| ||||| || | |||| | | ||| ||||| Sbjct 318043 ACAGCGCCTCATTTTCGCTGGTAAACAGCTCGAGGACGGGAGAACCTTGTCCGATTATAA 317984 Query 26948 CATTCAAAAAGAATCTACTATCCATCT 26974 ||||||||| ||||| || | ||||| Sbjct 317983 CATTCAAAAGGAATCCACCTTGCATCT 317957 >seq1955 Length=526780 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || || ||||| || | ||||| |||| | ||||| Sbjct 128030 ATGCAAATCTTCGTCAAGACCTTGACTGGGAAGACTATCACTCTCGAGGTCGAATCTTCG 128089 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | ||||| |||||| ||||| ||||| || ||||||||||| Sbjct 128090 GACACCATTGACAACGTCAAGGCTAAGATTCAGGACAAGGAAGGCATTCCTCCCGATCAG 128149 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||| | | |||||| || ||||| |||| | | | |||||| ||| Sbjct 128150 CAACGCCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGTTGTCCGACTACAAC 128209 Query 26949 ATTCAAAAAGAATCTAC 26965 || || || ||||| || Sbjct 128210 ATCCAGAAGGAATCGAC 128226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478650044526800