Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoctonia_20solani_20[genbank_20GCA_5F001286725.1_202015-08-31] 2,065 sequences; 56,028,462 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1112 116 4e-21 >seq1112 Length=1085269 Score = 116 bits (128), Expect = 4e-21 Identities = 217/319 (68%), Gaps = 0/319 (0%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| ||||| ||||| || | || ||||| || || |||| || ||| |||||| | Sbjct 231490 GCAAGCAAAATCGGTGTGCATTCCCTCGTCACGAGAGATCAGTTCGTTGGAGAATGTCAG 231431 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | || ||| || ||||||||||| || || |||||||| ||| || || || Sbjct 231430 GCCAGGCATCAATCCGCGCTTCTTGAGCCAGAAAATAGAAGCAAAGGAACCGGAGAAGAA 231371 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 ||||| || || || |||||||| || | ||| |||||||| ||| | | | Sbjct 231370 GATACCCTCGACCGCAGCAAATGCGACGAGACGCTCGGCAAACGTTGAGCGACGGTCGGA 231311 Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330 |||||| || | ||||| || || || ||||| || || || | || ||||| || | Sbjct 231310 GATCCACTTGAGCGCCCAGTCAGCCTTCTTCTTGATGCACGGAATAGTCTCGATGGCATC 231251 Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390 || | | || || | | | || ||||| || ||||| | || || || | Sbjct 231250 GAACAAAAATTCACGTTGCGCGGGCTCCTTGATGTAGGTGTCGATGAGCAATGAGTAAGT 231191 Query 93391 TTCAGAATGGACATTCTCC 93409 |||||| |||| |||||| Sbjct 231190 TTCAGAGTGGATGTTCTCC 231172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556846426030600