Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoctonia_20solani_20[genbank_20GCA_5F001286725.1_202015-08-31] 2,065 sequences; 56,028,462 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1112 192 1e-43 >seq1112 Length=1085269 Score = 192 bits (212), Expect = 1e-43 Identities = 246/335 (73%), Gaps = 12/335 (4%) Strand=Plus/Plus Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCC 42593 |||||| | |||||||| ||| | | |||||| |||| |||||| ||| ||| Sbjct 231173 GAGAACATCCACTCTGAAACTTACTC---ATTGCTCATCGACACCTACATCAAGGAGCCC 231229 Query 42594 GTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCG 42653 | | ||| | ||||| | ||||| ||||| || || ||||||||||||||||| Sbjct 231230 GCGCAACGTGAATTTTTGTTCGATGCCATCGAGACTATTCCGTGCATCAAGAAGAAGGCT 231289 Query 42654 GACTGGGCGCTCAACTGGATCGA-GAGTCCCGACGC--AACGTTCGGCGAGAGGCTGGTA 42710 |||||||||||||| |||||| || ||| ||| |||||| | |||| | || || Sbjct 231290 GACTGGGCGCTCAAGTGGATCTCCGA---CCGTCGCTCAACGTTTGCCGAGCGTCTCGTC 231346 Query 42711 GCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTC 42770 || ||| | || |||||||| ||||||||||| || |||| || || || ||||||||| Sbjct 231347 GCATTTGCTGCGGTCGAGGGTATCTTCTTCTCCGGTTCCTTTGCTTCTATTTTCTGGCTC 231406 Query 42771 AAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAG 42830 ||| || | | |||||| || || || ||||| |||||||| ||| | |||||| Sbjct 231407 AAGAAGCGCGGATTGATGCCTGGCCTGACATTCTCCAACGAACTGATCTCTCGTGACGAG 231466 Query 42831 GGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTC 42865 || |||| | || ||||| |||||| ||||||| Sbjct 231467 GGAATGCACACCGATTTTGCTTGCCTCTTGTTCTC 231501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944314824244400