Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoctonia_20solani_20[genbank_20GCA_5F001286725.1_202015-08-31] 2,065 sequences; 56,028,462 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1112 129 9e-25 >seq1112 Length=1085269 Score = 129 bits (142), Expect = 9e-25 Identities = 181/254 (71%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 |||| |||||| ||||| ||| ||||| ||||||||| |||||||| | |||||||| Sbjct 231498 AACAAGAGGCAAGCAAAATCGGTGTGCATTCCCTCGTCACGAGAGATCAGTTCGTTGGAG 231439 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | | ||||| ||||| | || ||| |||||||| ||||| | ||||| | |||| Sbjct 231438 AATGTCAGGCCAGGCATCAATCCGCGCTTCTTGAGCCAGAAAATAGAAGCAAAGGAACCG 231379 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 || ||||| ||||| || || ||||| || ||||| | ||| |||| | | | Sbjct 231378 GAGAAGAAGATACCCTCGACCGCAGCAAATGCGACGAGACGCTCGGCAAACGTTGAGCGA 231319 Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCG 160153 ||| | ||||| | ||||| ||||||||||| ||||||||| || |||| Sbjct 231318 CGGTCGGAGATCCACTTGAGCGCCCAGTCAGCCTTCTTCTTGATGCACGGAATAGTCTCG 231259 Query 160154 ACGGCGTTAAACAA 160167 | ||| | ||||| Sbjct 231258 ATGGCATCGAACAA 231245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795134675056400