Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoctonia_20solani_20[genbank_20GCA_5F001286725.1_202015-08-31] 2,065 sequences; 56,028,462 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1289 86.0 5e-11 >seq1289 Length=1058660 Score = 86.0 bits (94), Expect = 5e-11 Identities = 127/178 (71%), Gaps = 4/178 (2%) Strand=Plus/Minus Query 518117 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT--TTATCAA 518174 || || || |||| || || || | |||||| |||| ||| || | || | ||| | Sbjct 584207 GTCCCTCCCCCCAAGTCGAAGATCAAAACATTC--TTCTCTGTTTTCGATTGCTGATCGA 584150 Query 518175 GACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAG 518234 ||||||| |||| |||||| ||||| || || || ||||| | ||| || | || |||| Sbjct 584149 GACCATAGGCAATAGCAGCGGCAGTAGGCTCGTTGATAATACGCAAGACCTCGAGGCCAG 584090 Query 518235 CAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAAC 518292 |||| || ||||||||||| || | | || || || || || || |||||||| Sbjct 584089 CAATGGCACCAGCATCTTTAGTAGCCAGGCGCTGGGAGTCATTGAAGTAAGCAGGAAC 584032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780719927897890